Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rnf111Q99ML9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Gm15957-201ENSMUST00000118893 974 ntBASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Gm15693-201ENSMUST00000120470 637 ntBASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Gm13616-201ENSMUST00000120600 222 ntBASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Gm22175-201ENSMUST00000175007 78 ntBASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Gm27430-201ENSMUST00000184585 107 ntBASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Gm44333-201ENSMUST00000197168 107 ntBASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Dupd1-202ENSMUST00000224735 548 ntBASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rnf111Q99ML9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Gm24543-201ENSMUST00000103867 82 ntBASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rnf111Q99ML9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms