Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Gm15429-201ENSMUST00000151268 798 ntBASIC12.01□□□□□ -0.49
Scrt1Q99M85 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Mir3102-201ENSMUST00000175555 104 ntBASIC12.01□□□□□ -0.49
Scrt1Q99M85 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.01□□□□□ -0.49
Scrt1Q99M85 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.01□□□□□ -0.49
Scrt1Q99M85 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.01□□□□□ -0.49
Scrt1Q99M85 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Scrt1Q99M85 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12□□□□□ -0.49
Scrt1Q99M85 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Scrt1Q99M85 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Gm44981-201ENSMUST00000205549 1943 ntBASIC12□□□□□ -0.49
Scrt1Q99M85 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12□□□□□ -0.49
Scrt1Q99M85 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12□□□□□ -0.49
Scrt1Q99M85 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12□□□□□ -0.49
Scrt1Q99M85 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12□□□□□ -0.49
Scrt1Q99M85 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 AC123645.1-201ENSMUST00000228469 605 ntBASIC12□□□□□ -0.49
Scrt1Q99M85 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Scrt1Q99M85 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12□□□□□ -0.49
Scrt1Q99M85 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Scrt1Q99M85 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Scrt1Q99M85 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12□□□□□ -0.49
Scrt1Q99M85 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Scrt1Q99M85 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm23931-201ENSMUST00000103842 109 ntBASIC11.99□□□□□ -0.49
Scrt1Q99M85 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm12928-201ENSMUST00000117115 573 ntBASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm11814-201ENSMUST00000119515 929 ntBASIC11.99□□□□□ -0.49
Scrt1Q99M85 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.99□□□□□ -0.49
Scrt1Q99M85 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms