Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Gm28630-201ENSMUST00000187806 498 ntBASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Gm44608-201ENSMUST00000206827 855 ntBASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Gm15693-201ENSMUST00000120470 637 ntBASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Gm25144-201ENSMUST00000179561 110 ntBASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Gm25352-201ENSMUST00000179815 110 ntBASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Gm46209-201ENSMUST00000217912 553 ntBASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Gm16476-201ENSMUST00000221544 139 ntBASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.96□□□□□ -0.33
Chmp1b1Q99LU0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1b1Q99LU0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1b1Q99LU0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Chmp1b1Q99LU0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.96□□□□□ -0.34
Chmp1b1Q99LU0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1b1Q99LU0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Chmp1b1Q99LU0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1b1Q99LU0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chmp1b1Q99LU0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.96□□□□□ -0.34
Chmp1b1Q99LU0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gm6916-202ENSMUST00000205523 195 ntBASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gm18027-201ENSMUST00000218947 619 ntBASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Gm6888-201ENSMUST00000221983 706 ntBASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chmp1b1Q99LU0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms