Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clp1Q99LI9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.37□□□□□ -0.11
Clp1Q99LI9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Gm24255-201ENSMUST00000104481 128 ntBASIC14.37□□□□□ -0.11
Clp1Q99LI9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.37□□□□□ -0.11
Clp1Q99LI9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Gm6222-202ENSMUST00000182143 629 ntBASIC14.37□□□□□ -0.11
Clp1Q99LI9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.37□□□□□ -0.11
Clp1Q99LI9 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.37□□□□□ -0.11
Clp1Q99LI9 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.37□□□□□ -0.11
Clp1Q99LI9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clp1Q99LI9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Gm2231-201ENSMUST00000125661 612 ntBASIC14.36□□□□□ -0.11
Clp1Q99LI9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clp1Q99LI9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Clp1Q99LI9 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm11591-201ENSMUST00000120063 702 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm13297-201ENSMUST00000120205 934 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm6621-201ENSMUST00000193251 772 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm10608-202ENSMUST00000213924 676 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Gm7046-201ENSMUST00000221351 977 ntBASIC14.35□□□□□ -0.11
Clp1Q99LI9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clp1Q99LI9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms