Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cstf3Q99LI7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gm23935-201ENSMUST00000102303 57 ntBASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gm24270-201ENSMUST00000102326 57 ntBASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gm24245-201ENSMUST00000157318 57 ntBASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gm27430-201ENSMUST00000184585 107 ntBASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gm44333-201ENSMUST00000197168 107 ntBASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf3Q99LI7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Gm25948-201ENSMUST00000175334 112 ntBASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Gm46209-201ENSMUST00000217912 553 ntBASIC13.24□□□□□ -0.29
Cstf3Q99LI7 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf3Q99LI7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Gm14701-201ENSMUST00000117156 348 ntBASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Gm4804-201ENSMUST00000182234 999 ntBASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.23□□□□□ -0.29
Cstf3Q99LI7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf3Q99LI7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms