Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcc1Q99LI2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.52□□□□□ -0.24
Clcc1Q99LI2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Clcc1Q99LI2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcc1Q99LI2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Clcc1Q99LI2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcc1Q99LI2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Clcc1Q99LI2 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.52□□□□□ -0.24
Clcc1Q99LI2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcc1Q99LI2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcc1Q99LI2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Clcc1Q99LI2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Gm24420-201ENSMUST00000176676 59 ntBASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Gm27839-201ENSMUST00000184242 106 ntBASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Mir7085-201ENSMUST00000184353 66 ntBASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Gm29741-201ENSMUST00000192667 421 ntBASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.52□□□□□ -0.25
Clcc1Q99LI2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Gm18062-201ENSMUST00000208020 547 ntBASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Gm18055-201ENSMUST00000208254 547 ntBASIC13.52□□□□□ -0.25
Clcc1Q99LI2 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcc1Q99LI2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm13689-201ENSMUST00000119360 685 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm11425-201ENSMUST00000119608 498 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm15429-201ENSMUST00000151268 798 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm6244-201ENSMUST00000178732 841 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm44719-201ENSMUST00000206404 149 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm9396-201ENSMUST00000076703 567 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcc1Q99LI2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms