Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Gm6152-201ENSMUST00000151704 340 ntBASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Gm43758-201ENSMUST00000199500 367 ntBASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Gm18935-201ENSMUST00000212692 664 ntBASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.67□□□□□ -0.22
Cstf1Q99LC2 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.67□□□□□ -0.22
Cstf1Q99LC2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cstf1Q99LC2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.66□□□□□ -0.22
Cstf1Q99LC2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cstf1Q99LC2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Proscos-202ENSMUST00000178990 666 ntBASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Gm38341-201ENSMUST00000195357 515 ntBASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.65□□□□□ -0.22
Cstf1Q99LC2 Gm43118-201ENSMUST00000199149 775 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms