Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.49□□□□□ -0.41
Lims1Q99JW4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.49□□□□□ -0.41
Lims1Q99JW4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.49□□□□□ -0.41
Lims1Q99JW4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lims1Q99JW4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.48□□□□□ -0.41
Lims1Q99JW4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Gm14701-201ENSMUST00000117156 348 ntBASIC12.48□□□□□ -0.41
Lims1Q99JW4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Gm33320-201ENSMUST00000192232 530 ntBASIC12.48□□□□□ -0.41
Lims1Q99JW4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lims1Q99JW4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms