Protein–RNA interactions for Protein: Q924W5

Smc6, Structural maintenance of chromosomes protein 6, mousemouse

Predictions only

Length 1,097 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6Q924W5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.16□□□□□ -0.14
Smc6Q924W5 Gm13036-201ENSMUST00000117799 748 ntBASIC14.16□□□□□ -0.14
Smc6Q924W5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Gm29741-201ENSMUST00000192667 421 ntBASIC14.16□□□□□ -0.14
Smc6Q924W5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.16□□□□□ -0.14
Smc6Q924W5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Gm7461-201ENSMUST00000058918 827 ntBASIC14.16□□□□□ -0.14
Smc6Q924W5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smc6Q924W5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.16□□□□□ -0.14
Smc6Q924W5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smc6Q924W5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc6Q924W5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smc6Q924W5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Smc6Q924W5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.15□□□□□ -0.14
Smc6Q924W5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.15□□□□□ -0.14
Smc6Q924W5 Gm24589-201ENSMUST00000116692 94 ntBASIC14.15□□□□□ -0.14
Smc6Q924W5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smc6Q924W5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc6Q924W5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Smc6Q924W5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.15□□□□□ -0.14
Smc6Q924W5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Smc6Q924W5 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.15□□□□□ -0.14
Smc6Q924W5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Smc6Q924W5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smc6Q924W5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.14□□□□□ -0.15
Smc6Q924W5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.14□□□□□ -0.15
Smc6Q924W5 Gm5177-201ENSMUST00000183092 997 ntBASIC14.14□□□□□ -0.15
Smc6Q924W5 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.14□□□□□ -0.15
Smc6Q924W5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.14□□□□□ -0.15
Smc6Q924W5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.14□□□□□ -0.15
Smc6Q924W5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.14□□□□□ -0.15
Smc6Q924W5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.14□□□□□ -0.15
Smc6Q924W5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smc6Q924W5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Smc6Q924W5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smc6Q924W5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smc6Q924W5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
Smc6Q924W5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc6Q924W5 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Smc6Q924W5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.13□□□□□ -0.15
Smc6Q924W5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.13□□□□□ -0.15
Smc6Q924W5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smc6Q924W5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.13□□□□□ -0.15
Smc6Q924W5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.13□□□□□ -0.15
Smc6Q924W5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.13□□□□□ -0.15
Smc6Q924W5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.13□□□□□ -0.15
Smc6Q924W5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc6Q924W5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smc6Q924W5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms