Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Gm8396-201ENSMUST00000057361 823 ntBASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Gm14126-201ENSMUST00000122345 395 ntBASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Gm37293-201ENSMUST00000191658 295 ntBASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb3Q91XZ7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Gm10478-201ENSMUST00000084451 396 ntBASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb3Q91XZ7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb3Q91XZ7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms