Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm3436-201ENSMUST00000179930 840 ntBASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm43703-201ENSMUST00000200523 763 ntBASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm44719-201ENSMUST00000206404 149 ntBASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb8Q91XZ2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhb8Q91XZ2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Gm13453-201ENSMUST00000118708 357 ntBASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Gm4804-201ENSMUST00000182234 999 ntBASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Gm27321-201ENSMUST00000185021 205 ntBASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Grk6-205ENSMUST00000224653 2976 ntBASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb8Q91XZ2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms