Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.49□□□□□ -0.57
H1fooQ8VIK3 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
H1fooQ8VIK3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Mir698-201ENSMUST00000102164 109 ntBASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Gm15393-201ENSMUST00000120499 219 ntBASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Gm44344-201ENSMUST00000200287 129 ntBASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
H1fooQ8VIK3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms