Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim60Q8VI40 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Gm15653-201ENSMUST00000119247 907 ntBASIC14.17□□□□□ -0.14
Trim60Q8VI40 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.17□□□□□ -0.14
Trim60Q8VI40 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim60Q8VI40 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.16□□□□□ -0.14
Trim60Q8VI40 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trim60Q8VI40 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.16□□□□□ -0.14
Trim60Q8VI40 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Gm43474-201ENSMUST00000196415 774 ntBASIC14.16□□□□□ -0.14
Trim60Q8VI40 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.16□□□□□ -0.14
Trim60Q8VI40 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Mir497b-201ENSMUST00000093601 125 ntBASIC14.16□□□□□ -0.14
Trim60Q8VI40 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.16□□□□□ -0.14
Trim60Q8VI40 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim60Q8VI40 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.15□□□□□ -0.14
Trim60Q8VI40 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.15□□□□□ -0.14
Trim60Q8VI40 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Gm10253-201ENSMUST00000194270 940 ntBASIC14.15□□□□□ -0.14
Trim60Q8VI40 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Gm44335-201ENSMUST00000196879 141 ntBASIC14.15□□□□□ -0.14
Trim60Q8VI40 Gm44297-201ENSMUST00000198304 141 ntBASIC14.15□□□□□ -0.14
Trim60Q8VI40 Gm44346-201ENSMUST00000198851 141 ntBASIC14.15□□□□□ -0.14
Trim60Q8VI40 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim60Q8VI40 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms