Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Gm29608-201ENSMUST00000190444 463 ntBASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx39aQ8VDW0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 AY702102-202ENSMUST00000194651 1173 ntBASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Gm24447-201ENSMUST00000083977 338 ntBASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx39aQ8VDW0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Gm13612-201ENSMUST00000119276 390 ntBASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Gm7561-201ENSMUST00000211203 886 ntBASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ddx39aQ8VDW0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx39aQ8VDW0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms