Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Gm15678-201ENSMUST00000117573 960 ntBASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Gm8927-201ENSMUST00000181978 981 ntBASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Gm18307-201ENSMUST00000206864 949 ntBASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Gm3222-201ENSMUST00000071282 990 ntBASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Ndc1Q8VCB1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Gm8602-201ENSMUST00000184045 607 ntBASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Gm27701-201ENSMUST00000184498 110 ntBASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Mir7654-201ENSMUST00000185082 70 ntBASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Gm28911-201ENSMUST00000188837 117 ntBASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Gm43433-201ENSMUST00000196573 481 ntBASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc1Q8VCB1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Ndc1Q8VCB1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms