Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gm2756-201ENSMUST00000195851 400 ntBASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gm9229-201ENSMUST00000222777 126 ntBASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Lsm1Q8VC85 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lsm1Q8VC85 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lsm1Q8VC85 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Gm8410-201ENSMUST00000117225 605 ntBASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.14□□□□□ -0.31
Lsm1Q8VC85 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Gm8927-201ENSMUST00000181978 981 ntBASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Gm3222-201ENSMUST00000071282 990 ntBASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm1Q8VC85 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.13□□□□□ -0.31
Lsm1Q8VC85 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.13□□□□□ -0.31
Lsm1Q8VC85 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms