Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nup35Q8R4R6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Gm6443-201ENSMUST00000203599 874 ntBASIC11.16□□□□□ -0.62
Nup35Q8R4R6 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Syt7-205ENSMUST00000224135 1557 ntBASIC11.16□□□□□ -0.62
Nup35Q8R4R6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Gm2810-201ENSMUST00000118681 990 ntBASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Gm20553-201ENSMUST00000204205 844 ntBASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.15□□□□□ -0.62
Nup35Q8R4R6 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nup35Q8R4R6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nup35Q8R4R6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.63
Nup35Q8R4R6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nup35Q8R4R6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Nup35Q8R4R6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nup35Q8R4R6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms