Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Gm13316-201ENSMUST00000140537 691 ntBASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Gm13570-201ENSMUST00000140763 309 ntBASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Gm26185-201ENSMUST00000157692 266 ntBASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Gm44069-201ENSMUST00000204898 506 ntBASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx54Q8K4L0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Gm16202-201ENSMUST00000117532 544 ntBASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Gm43378-201ENSMUST00000199336 582 ntBASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 AC126253.1-202ENSMUST00000226732 835 ntBASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx54Q8K4L0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Gm11628-201ENSMUST00000117568 171 ntBASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Gm14208-201ENSMUST00000119645 678 ntBASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Mir1943-201ENSMUST00000158276 73 ntBASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Gm8738-201ENSMUST00000172606 329 ntBASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Gm38317-201ENSMUST00000195564 343 ntBASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Gm13097-201ENSMUST00000210722 397 ntBASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Gm5846-201ENSMUST00000193146 1414 ntBASIC17.77■□□□□ 0.44
Ddx54Q8K4L0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx54Q8K4L0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx54Q8K4L0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx54Q8K4L0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx54Q8K4L0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx54Q8K4L0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx54Q8K4L0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Ddx54Q8K4L0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Gm15276-201ENSMUST00000145953 498 ntBASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Gm20426-201ENSMUST00000173657 440 ntBASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Gm18556-201ENSMUST00000219748 1031 ntBASIC17.76■□□□□ 0.43
Ddx54Q8K4L0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms