Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.34□□□□□ -0.27
Rab43Q8CG50 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.34□□□□□ -0.27
Rab43Q8CG50 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab43Q8CG50 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab43Q8CG50 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab43Q8CG50 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rab43Q8CG50 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rab43Q8CG50 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab43Q8CG50 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rab43Q8CG50 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Rab43Q8CG50 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Rab43Q8CG50 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab43Q8CG50 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab43Q8CG50 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Gm15770-201ENSMUST00000117498 584 ntBASIC13.33□□□□□ -0.28
Rab43Q8CG50 Gm11803-201ENSMUST00000119966 444 ntBASIC13.33□□□□□ -0.28
Rab43Q8CG50 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.33□□□□□ -0.28
Rab43Q8CG50 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Gm5370-201ENSMUST00000187187 574 ntBASIC13.33□□□□□ -0.28
Rab43Q8CG50 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.33□□□□□ -0.28
Rab43Q8CG50 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab43Q8CG50 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.32□□□□□ -0.28
Rab43Q8CG50 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.32□□□□□ -0.28
Rab43Q8CG50 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.32□□□□□ -0.28
Rab43Q8CG50 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Itm2b-204ENSMUST00000228637 783 ntBASIC13.32□□□□□ -0.28
Rab43Q8CG50 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab43Q8CG50 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms