Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc28bQ8CEG5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Gm6973-201ENSMUST00000117080 721 ntBASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Gm44719-201ENSMUST00000206404 149 ntBASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc28bQ8CEG5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc28bQ8CEG5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc28bQ8CEG5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc28bQ8CEG5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc28bQ8CEG5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
Ccdc28bQ8CEG5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc28bQ8CEG5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc28bQ8CEG5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ccdc28bQ8CEG5 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.52□□□□□ -0.24
Ccdc28bQ8CEG5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Gm28659-201ENSMUST00000188013 759 ntBASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Gm18195-201ENSMUST00000207604 706 ntBASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc28bQ8CEG5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Gm17971-201ENSMUST00000190239 806 ntBASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc28bQ8CEG5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms