Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lysmd4Q8CC84 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Gm45453-201ENSMUST00000211758 853 ntBASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lysmd4Q8CC84 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lysmd4Q8CC84 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lysmd4Q8CC84 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Lysmd4Q8CC84 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Lysmd4Q8CC84 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lysmd4Q8CC84 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lysmd4Q8CC84 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.27□□□□□ -0.44
Lysmd4Q8CC84 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lysmd4Q8CC84 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Lysmd4Q8CC84 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lysmd4Q8CC84 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Gm12260-201ENSMUST00000122447 411 ntBASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Mir3113-201ENSMUST00000175478 76 ntBASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Gm27631-201ENSMUST00000184163 466 ntBASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lysmd4Q8CC84 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Mir698-201ENSMUST00000102164 109 ntBASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.26□□□□□ -0.45
Lysmd4Q8CC84 Gm18057-201ENSMUST00000208220 503 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms