Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Alx1Q8C8B0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Alx1Q8C8B0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Alx1Q8C8B0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.93■□□□□ 0.14
Alx1Q8C8B0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alx1Q8C8B0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Alx1Q8C8B0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alx1Q8C8B0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Alx1Q8C8B0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alx1Q8C8B0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.92■□□□□ 0.14
Alx1Q8C8B0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Gm9002-201ENSMUST00000178437 499 ntBASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.92■□□□□ 0.14
Alx1Q8C8B0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Gm18473-201ENSMUST00000220543 868 ntBASIC15.91■□□□□ 0.14
Alx1Q8C8B0 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Alx1Q8C8B0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Alx1Q8C8B0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms