Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.11■□□□□ 0.01
Trim9Q8C7M3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim9Q8C7M3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Gm15770-201ENSMUST00000117498 584 ntBASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Gm20949-201ENSMUST00000206478 952 ntBASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Grk6-205ENSMUST00000224653 2976 ntBASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Syt7-204ENSMUST00000223586 1344 ntBASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim9Q8C7M3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Gm22189-201ENSMUST00000103822 86 ntBASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Gm9797-201ENSMUST00000052902 613 ntBASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim9Q8C7M3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trim9Q8C7M3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim9Q8C7M3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim9Q8C7M3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trim9Q8C7M3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trim9Q8C7M3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim9Q8C7M3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim9Q8C7M3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim9Q8C7M3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim9Q8C7M3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim9Q8C7M3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim9Q8C7M3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim9Q8C7M3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.08■□□□□ 0
Trim9Q8C7M3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim9Q8C7M3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms