Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Gm44492-201ENSMUST00000197012 141 ntBASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Gm10175-201ENSMUST00000086013 645 ntBASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tsen54Q8C2A2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Gm37935-201ENSMUST00000192012 982 ntBASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Gm17968-201ENSMUST00000194902 784 ntBASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Tsen54Q8C2A2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tsen54Q8C2A2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tsen54Q8C2A2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tsen54Q8C2A2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tsen54Q8C2A2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tsen54Q8C2A2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tsen54Q8C2A2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.46□□□□□ -0.58
Tsen54Q8C2A2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tsen54Q8C2A2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tsen54Q8C2A2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tsen54Q8C2A2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Gm45747-201ENSMUST00000212203 999 ntBASIC11.45□□□□□ -0.58
Tsen54Q8C2A2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms