Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smim4Q8C1Q6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm24543-201ENSMUST00000103867 82 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm27397-201ENSMUST00000184997 107 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm10253-201ENSMUST00000194270 940 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm6916-202ENSMUST00000205523 195 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm16476-201ENSMUST00000221544 139 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smim4Q8C1Q6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Mir698-201ENSMUST00000102164 109 ntBASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Gm24513-201ENSMUST00000174964 138 ntBASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Gm29541-201ENSMUST00000191351 678 ntBASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Gm33320-201ENSMUST00000192232 530 ntBASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Gm2213-201ENSMUST00000197485 688 ntBASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim4Q8C1Q6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms