Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Gm12585-201ENSMUST00000117307 290 ntBASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rab11fip4Q8BQP8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Gm12091-201ENSMUST00000146791 830 ntBASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Gm18018-201ENSMUST00000198273 408 ntBASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab11fip4Q8BQP8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Gm37917-201ENSMUST00000194711 392 ntBASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.17■□□□□ 0.02
Rab11fip4Q8BQP8 Gm18027-201ENSMUST00000218947 619 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms