Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm8862-201ENSMUST00000198379 1346 ntBASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Gm9333-201ENSMUST00000205452 1323 ntBASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Gm24514-201ENSMUST00000174961 285 ntBASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Gm43947-201ENSMUST00000203019 959 ntBASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Gm13097-201ENSMUST00000210722 397 ntBASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 AC069562.3-201ENSMUST00000225387 587 ntBASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col16a1Q8BLX7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Gm23270-201ENSMUST00000104055 131 ntBASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col16a1Q8BLX7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gm10434-201ENSMUST00000101158 471 ntBASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gm11531-201ENSMUST00000117614 555 ntBASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gm12217-201ENSMUST00000118858 696 ntBASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gm8885-201ENSMUST00000189382 598 ntBASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gm44772-201ENSMUST00000207623 1191 ntBASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Gm6458-201ENSMUST00000211573 635 ntBASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col16a1Q8BLX7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms