Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chmp2bQ8BJF9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Gm8000-201ENSMUST00000188378 592 ntBASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Chmp2bQ8BJF9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Gm18766-201ENSMUST00000189811 808 ntBASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Gm43125-201ENSMUST00000201724 730 ntBASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Chmp2bQ8BJF9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Chmp2bQ8BJF9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Gm9719-201ENSMUST00000162765 543 ntBASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Mir6990-201ENSMUST00000183724 91 ntBASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Gm29541-201ENSMUST00000191351 678 ntBASIC14.02□□□□□ -0.17
Chmp2bQ8BJF9 Gm44771-201ENSMUST00000206975 626 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms