Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh20Q8BIZ0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh20Q8BIZ0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdh20Q8BIZ0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh20Q8BIZ0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh20Q8BIZ0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh20Q8BIZ0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Pcdh20Q8BIZ0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh20Q8BIZ0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh20Q8BIZ0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Gm27680-201ENSMUST00000184192 160 ntBASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh20Q8BIZ0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh20Q8BIZ0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh20Q8BIZ0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh20Q8BIZ0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh20Q8BIZ0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Gm44344-201ENSMUST00000200287 129 ntBASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh20Q8BIZ0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh20Q8BIZ0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh20Q8BIZ0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh20Q8BIZ0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh20Q8BIZ0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh20Q8BIZ0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh20Q8BIZ0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh20Q8BIZ0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh20Q8BIZ0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh20Q8BIZ0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms