Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc40Q8BI79 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Gm28630-201ENSMUST00000187806 498 ntBASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc40Q8BI79 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Gm14701-201ENSMUST00000117156 348 ntBASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Gm8410-201ENSMUST00000117225 605 ntBASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Gm25144-201ENSMUST00000179561 110 ntBASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Gm25352-201ENSMUST00000179815 110 ntBASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc40Q8BI79 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc40Q8BI79 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc40Q8BI79 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms