Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Slc5a7Q8BGY9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Gm27301-201ENSMUST00000184012 127 ntBASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc5a7Q8BGY9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Gm13036-201ENSMUST00000117799 748 ntBASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Gm43347-201ENSMUST00000200226 580 ntBASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc5a7Q8BGY9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms