Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gm12928-201ENSMUST00000117115 573 ntBASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gm15429-201ENSMUST00000151268 798 ntBASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gm18056-201ENSMUST00000207670 568 ntBASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gm18061-201ENSMUST00000208350 562 ntBASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gm18063-201ENSMUST00000208529 568 ntBASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gm18052-201ENSMUST00000208750 559 ntBASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gm6013-201ENSMUST00000212264 699 ntBASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.79■□□□□ 0.12
Prpf40bQ80W14 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Gm14723-201ENSMUST00000118686 215 ntBASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.79■□□□□ 0.12
Prpf40bQ80W14 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf40bQ80W14 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Gm40466-201ENSMUST00000212174 422 ntBASIC15.78■□□□□ 0.12
Prpf40bQ80W14 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf40bQ80W14 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms