Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpp38Q80UU2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Gm44855-201ENSMUST00000205725 362 ntBASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpp38Q80UU2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.66□□□□□ -0.22
Rpp38Q80UU2 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm12403-201ENSMUST00000121384 959 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm15376-201ENSMUST00000122258 783 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm27437-201ENSMUST00000183429 107 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm10576-201ENSMUST00000191927 825 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpp38Q80UU2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms