Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cspg5Q71M36 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Gm21470-201ENSMUST00000187680 696 ntBASIC14.22□□□□□ -0.13
Cspg5Q71M36 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.22□□□□□ -0.13
Cspg5Q71M36 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.22□□□□□ -0.13
Cspg5Q71M36 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cspg5Q71M36 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.21□□□□□ -0.13
Cspg5Q71M36 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.21□□□□□ -0.13
Cspg5Q71M36 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.21□□□□□ -0.13
Cspg5Q71M36 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Mir7654-201ENSMUST00000185082 70 ntBASIC14.21□□□□□ -0.13
Cspg5Q71M36 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Cspg5Q71M36 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.21□□□□□ -0.13
Cspg5Q71M36 Gm5279-201ENSMUST00000199575 745 ntBASIC14.21□□□□□ -0.13
Cspg5Q71M36 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.21□□□□□ -0.13
Cspg5Q71M36 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cspg5Q71M36 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cspg5Q71M36 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cspg5Q71M36 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cspg5Q71M36 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cspg5Q71M36 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cspg5Q71M36 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.2□□□□□ -0.14
Cspg5Q71M36 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.2□□□□□ -0.14
Cspg5Q71M36 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.2□□□□□ -0.14
Cspg5Q71M36 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.2□□□□□ -0.14
Cspg5Q71M36 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg5Q71M36 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms