Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm14381-201ENSMUST00000122105 414 ntBASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Gm17376-201ENSMUST00000166016 84 ntBASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ddx55Q6ZPL9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Gm8805-201ENSMUST00000117848 313 ntBASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Gm4986-201ENSMUST00000119731 549 ntBASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ddx55Q6ZPL9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Gm37489-201ENSMUST00000191883 159 ntBASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Gm21769-201ENSMUST00000211922 111 ntBASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Mir433-201ENSMUST00000093564 124 ntBASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ddx55Q6ZPL9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Gm16202-201ENSMUST00000117532 544 ntBASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.47■□□□□ 0.07
Ddx55Q6ZPL9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms