Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rad54bQ6PFE3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Mir1897-201ENSMUST00000122581 272 ntBASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Gm27533-201ENSMUST00000183800 152 ntBASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Gm10766-202ENSMUST00000194123 606 ntBASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Gm5425-201ENSMUST00000214125 459 ntBASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Shd-206ENSMUST00000225145 998 ntBASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rad54bQ6PFE3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.78□□□□□ -0.2
Rad54bQ6PFE3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms