Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Gm26083-201ENSMUST00000157904 193 ntBASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Gm7783-201ENSMUST00000204795 781 ntBASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.86■□□□□ 0.13
Nup98Q6PFD9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Nup98Q6PFD9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Gm38241-201ENSMUST00000192641 898 ntBASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Gm43822-201ENSMUST00000200285 476 ntBASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Gm5781-201ENSMUST00000219792 443 ntBASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Gm19163-201ENSMUST00000223313 780 ntBASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Nup98Q6PFD9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms