Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf220Q6PDX6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rnf220Q6PDX6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf220Q6PDX6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Gm13884-201ENSMUST00000118103 829 ntBASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Gm11452-201ENSMUST00000122376 690 ntBASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Gm9726-201ENSMUST00000180321 678 ntBASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf220Q6PDX6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms