Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt42Q6IFX2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Krt42Q6IFX2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt42Q6IFX2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.02□□□□□ -0.17
Krt42Q6IFX2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt42Q6IFX2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.01□□□□□ -0.17
Krt42Q6IFX2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt42Q6IFX2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Krt42Q6IFX2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt42Q6IFX2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt42Q6IFX2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt42Q6IFX2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt42Q6IFX2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms