Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VclQ64727 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VclQ64727 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VclQ64727 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
VclQ64727 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.48□□□□□ -0.25
VclQ64727 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
VclQ64727 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.48□□□□□ -0.25
VclQ64727 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VclQ64727 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VclQ64727 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
VclQ64727 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.48□□□□□ -0.25
VclQ64727 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.48□□□□□ -0.25
VclQ64727 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.48□□□□□ -0.25
VclQ64727 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VclQ64727 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.48□□□□□ -0.25
VclQ64727 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VclQ64727 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VclQ64727 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VclQ64727 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.48□□□□□ -0.25
VclQ64727 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VclQ64727 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
VclQ64727 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VclQ64727 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VclQ64727 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.47□□□□□ -0.25
VclQ64727 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.47□□□□□ -0.25
VclQ64727 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.47□□□□□ -0.25
VclQ64727 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VclQ64727 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
VclQ64727 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VclQ64727 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
VclQ64727 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
VclQ64727 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.47□□□□□ -0.25
VclQ64727 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
VclQ64727 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
VclQ64727 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
VclQ64727 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
VclQ64727 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.46□□□□□ -0.25
VclQ64727 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.46□□□□□ -0.25
VclQ64727 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
VclQ64727 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.46□□□□□ -0.25
VclQ64727 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.46□□□□□ -0.25
VclQ64727 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
VclQ64727 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.46□□□□□ -0.25
VclQ64727 Gm8515-201ENSMUST00000194852 576 ntBASIC13.46□□□□□ -0.25
VclQ64727 Gm44719-201ENSMUST00000206404 149 ntBASIC13.46□□□□□ -0.25
VclQ64727 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
VclQ64727 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.46□□□□□ -0.25
VclQ64727 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
VclQ64727 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
VclQ64727 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.46□□□□□ -0.25
VclQ64727 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VclQ64727 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VclQ64727 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VclQ64727 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
VclQ64727 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms