Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.19□□□□□ -0.3
Sdc3Q64519 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sdc3Q64519 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sdc3Q64519 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Sdc3Q64519 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sdc3Q64519 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sdc3Q64519 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sdc3Q64519 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sdc3Q64519 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sdc3Q64519 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sdc3Q64519 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Gm12490-201ENSMUST00000120255 560 ntBASIC13.18□□□□□ -0.3
Sdc3Q64519 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sdc3Q64519 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.18□□□□□ -0.3
Sdc3Q64519 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.18□□□□□ -0.3
Sdc3Q64519 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sdc3Q64519 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sdc3Q64519 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sdc3Q64519 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Sdc3Q64519 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Sdc3Q64519 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.18□□□□□ -0.3
Sdc3Q64519 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc3Q64519 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Sdc3Q64519 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.17□□□□□ -0.3
Sdc3Q64519 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Gm4804-201ENSMUST00000182234 999 ntBASIC13.17□□□□□ -0.3
Sdc3Q64519 Gm9908-201ENSMUST00000211534 448 ntBASIC13.17□□□□□ -0.3
Sdc3Q64519 Gm18624-201ENSMUST00000220966 658 ntBASIC13.17□□□□□ -0.3
Sdc3Q64519 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sdc3Q64519 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.17□□□□□ -0.3
Sdc3Q64519 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc3Q64519 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc3Q64519 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms