Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rai1Q61818 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rai1Q61818 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Gm14381-201ENSMUST00000122105 414 ntBASIC13.04□□□□□ -0.32
Rai1Q61818 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Gm17376-201ENSMUST00000166016 84 ntBASIC13.04□□□□□ -0.32
Rai1Q61818 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.04□□□□□ -0.32
Rai1Q61818 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rai1Q61818 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.03□□□□□ -0.32
Rai1Q61818 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rai1Q61818 Mir877-201ENSMUST00000104738 85 ntBASIC13.03□□□□□ -0.32
Rai1Q61818 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.03□□□□□ -0.32
Rai1Q61818 Gm13297-201ENSMUST00000120205 934 ntBASIC13.03□□□□□ -0.32
Rai1Q61818 Gm24548-201ENSMUST00000158650 108 ntBASIC13.03□□□□□ -0.32
Rai1Q61818 Gm2383-201ENSMUST00000181461 807 ntBASIC13.03□□□□□ -0.32
Rai1Q61818 Gm27320-201ENSMUST00000184892 109 ntBASIC13.03□□□□□ -0.32
Rai1Q61818 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.03□□□□□ -0.32
Rai1Q61818 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.03□□□□□ -0.32
Rai1Q61818 Gm8227-201ENSMUST00000223306 571 ntBASIC13.03□□□□□ -0.32
Rai1Q61818 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rai1Q61818 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.03□□□□□ -0.32
Rai1Q61818 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rai1Q61818 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rai1Q61818 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Rai1Q61818 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rai1Q61818 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rai1Q61818 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rai1Q61818 Snord83b-201ENSMUST00000104546 94 ntBASIC13.02□□□□□ -0.32
Rai1Q61818 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.02□□□□□ -0.32
Rai1Q61818 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rai1Q61818 Gm37042-201ENSMUST00000193816 581 ntBASIC13.02□□□□□ -0.32
Rai1Q61818 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.02□□□□□ -0.32
Rai1Q61818 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rai1Q61818 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rai1Q61818 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rai1Q61818 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rai1Q61818 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rai1Q61818 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rai1Q61818 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rai1Q61818 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rai1Q61818 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rai1Q61818 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rai1Q61818 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.02□□□□□ -0.33
Rai1Q61818 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rai1Q61818 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rai1Q61818 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rai1Q61818 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rai1Q61818 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rai1Q61818 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.02□□□□□ -0.33
Rai1Q61818 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rai1Q61818 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.02□□□□□ -0.33
Rai1Q61818 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.02□□□□□ -0.33
Rai1Q61818 Gm11978-201ENSMUST00000122315 466 ntBASIC13.02□□□□□ -0.33
Rai1Q61818 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rai1Q61818 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.02□□□□□ -0.33
Rai1Q61818 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.02□□□□□ -0.33
Rai1Q61818 Gm20482-202ENSMUST00000174729 825 ntBASIC13.02□□□□□ -0.33
Rai1Q61818 Gm37466-201ENSMUST00000195692 652 ntBASIC13.02□□□□□ -0.33
Rai1Q61818 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rai1Q61818 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.02□□□□□ -0.33
Rai1Q61818 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rai1Q61818 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.02□□□□□ -0.33
Rai1Q61818 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Rai1Q61818 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms