Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.9□□□□□ -0.34
Tnfaip3Q60769 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfaip3Q60769 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfaip3Q60769 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfaip3Q60769 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Gm11524-201ENSMUST00000119349 807 ntBASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Gm43094-201ENSMUST00000196549 921 ntBASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Gm19078-201ENSMUST00000206311 727 ntBASIC12.89□□□□□ -0.35
Tnfaip3Q60769 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfaip3Q60769 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Mir7654-201ENSMUST00000185082 70 ntBASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Gm18307-201ENSMUST00000206864 949 ntBASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Gm9908-201ENSMUST00000211534 448 ntBASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Gm7653-201ENSMUST00000214567 508 ntBASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms