Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ClpbQ60649 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.16□□□□□ -0.3
ClpbQ60649 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.16□□□□□ -0.3
ClpbQ60649 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.16□□□□□ -0.3
ClpbQ60649 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ClpbQ60649 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ClpbQ60649 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClpbQ60649 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.16□□□□□ -0.3
ClpbQ60649 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.16□□□□□ -0.3
ClpbQ60649 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.15□□□□□ -0.3
ClpbQ60649 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ClpbQ60649 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ClpbQ60649 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ClpbQ60649 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.15□□□□□ -0.3
ClpbQ60649 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.15□□□□□ -0.3
ClpbQ60649 Gm9522-201ENSMUST00000182394 926 ntBASIC13.15□□□□□ -0.3
ClpbQ60649 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.15□□□□□ -0.3
ClpbQ60649 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.15□□□□□ -0.3
ClpbQ60649 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.15□□□□□ -0.3
ClpbQ60649 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
ClpbQ60649 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
ClpbQ60649 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ClpbQ60649 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClpbQ60649 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
ClpbQ60649 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
ClpbQ60649 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
ClpbQ60649 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
ClpbQ60649 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ClpbQ60649 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.14□□□□□ -0.31
ClpbQ60649 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ClpbQ60649 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ClpbQ60649 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ClpbQ60649 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ClpbQ60649 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ClpbQ60649 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.14□□□□□ -0.31
ClpbQ60649 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ClpbQ60649 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.14□□□□□ -0.31
ClpbQ60649 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.14□□□□□ -0.31
ClpbQ60649 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.14□□□□□ -0.31
ClpbQ60649 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ClpbQ60649 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClpbQ60649 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.14□□□□□ -0.31
ClpbQ60649 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms