Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 AA543401-201ENSMUST00000164248 1269 ntBASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav15-1-dv6-1Q5R1D2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm18737-201ENSMUST00000173594 937 ntBASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mir5126-201ENSMUST00000175513 77 ntBASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms