Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Gm25700-201ENSMUST00000177693 110 ntBASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Gm31256-201ENSMUST00000194705 506 ntBASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vps13aQ5H8C4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Gm5781-201ENSMUST00000219792 443 ntBASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Gm17330-201ENSMUST00000221047 165 ntBASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps13aQ5H8C4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Gm13045-201ENSMUST00000119019 712 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Gm15131-201ENSMUST00000119124 595 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Gm10051-201ENSMUST00000145209 414 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Rmrp-201ENSMUST00000157463 271 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Ntng1-201ENSMUST00000051253 327 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps13aQ5H8C4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Gm38210-201ENSMUST00000191944 809 ntBASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Gm4768-201ENSMUST00000206199 686 ntBASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms