Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Gm27989-201ENSMUST00000184721 107 ntBASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Gm18905-201ENSMUST00000205454 928 ntBASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Gm15240-201ENSMUST00000118156 720 ntBASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf20Q5DTM8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.29■□□□□ 0.2
Rnf20Q5DTM8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms