Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.43□□□□□ -0.58
Znf48Q3US17 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Gm24543-201ENSMUST00000103867 82 ntBASIC11.43□□□□□ -0.58
Znf48Q3US17 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.43□□□□□ -0.58
Znf48Q3US17 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Znf48Q3US17 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Znf48Q3US17 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Znf48Q3US17 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.43□□□□□ -0.58
Znf48Q3US17 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Mir7085-201ENSMUST00000184353 66 ntBASIC11.43□□□□□ -0.58
Znf48Q3US17 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.43□□□□□ -0.58
Znf48Q3US17 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.43□□□□□ -0.58
Znf48Q3US17 Gm9908-201ENSMUST00000211534 448 ntBASIC11.43□□□□□ -0.58
Znf48Q3US17 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.43□□□□□ -0.58
Znf48Q3US17 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.43□□□□□ -0.58
Znf48Q3US17 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Znf48Q3US17 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Znf48Q3US17 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.43□□□□□ -0.58
Znf48Q3US17 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Znf48Q3US17 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.42□□□□□ -0.58
Znf48Q3US17 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.42□□□□□ -0.58
Znf48Q3US17 Gm45657-201ENSMUST00000211318 1349 ntBASIC11.42□□□□□ -0.58
Znf48Q3US17 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.42□□□□□ -0.58
Znf48Q3US17 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.42□□□□□ -0.58
Znf48Q3US17 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.42□□□□□ -0.58
Znf48Q3US17 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.42□□□□□ -0.58
Znf48Q3US17 Gm44719-201ENSMUST00000206404 149 ntBASIC11.42□□□□□ -0.58
Znf48Q3US17 Shd-206ENSMUST00000225145 998 ntBASIC11.42□□□□□ -0.58
Znf48Q3US17 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.42□□□□□ -0.58
Znf48Q3US17 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Znf48Q3US17 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms