Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg7Q3ULF4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.25■□□□□ 0.19
Spg7Q3ULF4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Spg7Q3ULF4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg7Q3ULF4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg7Q3ULF4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg7Q3ULF4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Spg7Q3ULF4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Spg7Q3ULF4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.25■□□□□ 0.19
Spg7Q3ULF4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Spg7Q3ULF4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Gm16177-201ENSMUST00000120728 718 ntBASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Gm27331-201ENSMUST00000183705 60 ntBASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Gm29705-201ENSMUST00000212598 474 ntBASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Gm10478-201ENSMUST00000084451 396 ntBASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Spg7Q3ULF4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Gm13392-201ENSMUST00000117708 150 ntBASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.23■□□□□ 0.19
Spg7Q3ULF4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.23■□□□□ 0.19
Spg7Q3ULF4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Gm6007-201ENSMUST00000208170 823 ntBASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Spg7Q3ULF4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg7Q3ULF4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Spg7Q3ULF4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg7Q3ULF4 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.22■□□□□ 0.19
Spg7Q3ULF4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Spg7Q3ULF4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg7Q3ULF4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Spg7Q3ULF4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Spg7Q3ULF4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg7Q3ULF4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Spg7Q3ULF4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms