Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim43aQ3TL54 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Gm6222-201ENSMUST00000120787 396 ntBASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim43aQ3TL54 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim43aQ3TL54 Gm14701-201ENSMUST00000117156 348 ntBASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim43aQ3TL54 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim43aQ3TL54 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms